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Bulletin of State University of Education. Series: Physics and Mathematics

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Registration of asparaginase single molecule activity using a nanopore detector

https://doi.org/10.18384/2949-5067-2024-1-20-32

Abstract

Aim. The possibility of using a nanopore to monitor the functioning of asparaginase has been studied.

Methodology. In this work, a SiN-based nanopore was constructed in which the L-asparaginase molecule was embedded. The catalytic activity of the L-asparaginase molecule, embedded in the nanopore, has been monitored by observing the change in the ion current in the cell with this nanopore. This approach is useful for studying the catalytic activity based on single enzyme molecules embedded in a nanopore.

Results. A nanopore detector for studying the catalytic activity of L-asparaginase has been developed. It has been found that this detector made it possible to monitor the activity of this enzyme.

Research implications. It has been shown that a nanopore detector, with a nanopore size of the order of 6 nm, can be used to study the activity of asparaginase. It is possible to carry out realtime monitoring of changes in the form of L-asparaginase, which consisted in monitoring changes in the ion current passing through a nanopore, in which asparaginase was immobilized. The results obtained can be of use in the analysis of the functioning of enzymes at the level of single molecules. 

About the Authors

Yu. Ivanov
Institute of Biomedical Chemistry; Joint Institute for High Temperatures of the Russian Academy of Sciences
Russian Federation

ulitsa Pogodinskaya 10 build. 8, Moscow 119121; ulitsa Izhorskaya 13, Moscow 125412 



A. Ableev
Institute of Biomedical Chemistry
Russian Federation

ulitsa Pogodinskaya 10 build. 8, Moscow 119121



V. Shumyantseva
Institute of Biomedical Chemistry
Russian Federation

ulitsa Pogodinskaya 10 build. 8, Moscow 119121



D. Zhdanov
Institute of Biomedical Chemistry
Russian Federation

ulitsa Pogodinskaya 10 build. 8, Moscow 119121



M. Pokrovskaya
Institute of Biomedical Chemistry
Russian Federation

ulitsa Pogodinskaya 10 build. 8, Moscow 119121



S. Aleksandrova
Institute of Biomedical Chemistry
Russian Federation

ulitsa Pogodinskaya 10 build. 8, Moscow 119121



I. Ivanova
Institute of Biomedical Chemistry
Russian Federation

ulitsa Pogodinskaya 10 build. 8, Moscow 119121



A. Vinogradova
Institute of Biomedical Chemistry
Russian Federation

ulitsa Pogodinskaya 10 build. 8, Moscow 119121



E. Nevedrova
Institute of Biomedical Chemistry
Russian Federation

ulitsa Pogodinskaya 10 build. 8, Moscow 119121



V. Ziborov
Institute of Biomedical Chemistry; Joint Institute for High Temperatures of the Russian Academy of Sciences
Russian Federation

ulitsa Pogodinskaya 10 build. 8, Moscow 119121; ulitsa Izhorskaya 13, Moscow 125412 



N. Vaulin
Alferov Federal State Budgetary Institution of Higher Education and Science Saint Petersburg National Research Academic University of the Russian Academy of Sciences
Russian Federation

ulitsa Khlopina 8 build. 3 letter A, St. Petersburg 194021



D. Lebedev
Alferov Federal State Budgetary Institution of Higher Education and Science Saint Petersburg National Research Academic University of the Russian Academy of Sciences
Russian Federation

ulitsa Khlopina 8 build. 3 letter A, St. Petersburg 194021



A. Bukatin
Alferov Federal State Budgetary Institution of Higher Education and Science Saint Petersburg National Research Academic University of the Russian Academy of Sciences
Russian Federation

ulitsa Khlopina 8 build. 3 letter A, St. Petersburg 194021



I. Mukhin
Alferov Federal State Budgetary Institution of Higher Education and Science Saint Petersburg National Research Academic University of the Russian Academy of Sciences
Russian Federation

ulitsa Khlopina 8 build. 3 letter A, St. Petersburg 194021



A. Archakov
Institute of Biomedical Chemistry
Russian Federation

ulitsa Pogodinskaya 10 build. 8, Moscow 119121



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